Independent Study to consolidate this week

Transcriptomics 3: Visualising

Published

24 August, 2025

You need only do the section for one of the examples.

You need only do the section for your own project data

🎄 Arabidopisis

🎬 Open your arab-88H RStudio Project and the cont-low-aerial.R script you began in the Consolidation study of Transcriptomics 1 and continued to work on in Transcriptomics 2. Use the code you used in the workshop (in cont-low-root.R) as a template to visualise the results for the comparison between the control and low nickel in roots.

💉 Leishmania

🎬 Open your leish-88H RStudio Project and the pro_ama.R script you began in the Consolidation study of Transcriptomics 1 and continued to work on in Transcriptomics 2. Use the code you used in the workshop (in pro_meta.R) as a template to visualise the results for the comparison between the procyclic promastigote and amastigote stages.

🐭 Stem cells

🎬 Open your mice-88H RStudio Project and the hspc-lthsc.R script you began in the Consolidation study of Transcriptomics 1 and continued to work on in Transcriptomics 2. Use the code you used in the workshop (in hspc-prog.R) as a template to visualise the results for the comparison between HSPC and LT-HSPC cells